+ |
LEF1 | up-regulates quantity by expression
transcriptional regulation
|
OCA2 |
0.256 |
Identifier |
Residue |
Sequence |
Organism |
Cell Line |
SIGNOR-254555 |
|
|
Homo sapiens |
|
pmid |
sentence |
22234890 |
the SNP rs12913832 has strong statistical association with human pigmentation. It is located within an intron of the nonpigment gene HERC2, 21 kb upstream of the pigment gene OCA2, and the region surrounding rs12913832 is highly conserved among animal species.In darkly pigmented human melanocytes carrying the rs12913832 T-allele, we detected binding of the transcription factors HLTF, LEF1, and MITF to the HERC2 rs12913832 enhancer, and a long-range chromatin loop between this enhancer and the OCA2 promoter that leads to elevated OCA2 expression. |
|
Publications: |
1 |
Organism: |
Homo Sapiens |
+ |
MITF | up-regulates quantity by expression
transcriptional regulation
|
OCA2 |
0.362 |
Identifier |
Residue |
Sequence |
Organism |
Cell Line |
SIGNOR-254556 |
|
|
Homo sapiens |
Melanocyte |
pmid |
sentence |
22234890 |
the SNP rs12913832 has strong statistical association with human pigmentation. It is located within an intron of the nonpigment gene HERC2, 21 kb upstream of the pigment gene OCA2, and the region surrounding rs12913832 is highly conserved among animal species.In darkly pigmented human melanocytes carrying the rs12913832 T-allele, we detected binding of the transcription factors HLTF, LEF1, and MITF to the HERC2 rs12913832 enhancer, and a long-range chromatin loop between this enhancer and the OCA2 promoter that leads to elevated OCA2 expression. |
|
Publications: |
1 |
Organism: |
Homo Sapiens |
+ |
HLTF | up-regulates quantity by expression
transcriptional regulation
|
OCA2 |
0.36 |
Identifier |
Residue |
Sequence |
Organism |
Cell Line |
SIGNOR-254425 |
|
|
Homo sapiens |
Melanocyte |
pmid |
sentence |
22234890 |
The SNP rs12913832 has strong statistical association with human pigmentation. It is located within an intron of the nonpigment gene HERC2, 21 kb upstream of the pigment gene OCA2, and the region surrounding rs12913832 is highly conserved among animal species.In darkly pigmented human melanocytes carrying the rs12913832 T-allele, we detected binding of the transcription factors HLTF, LEF1, and MITF to the HERC2 rs12913832 enhancer, and a long-range chromatin loop between this enhancer and the OCA2 promoter that leads to elevated OCA2 expression. |
|
Publications: |
1 |
Organism: |
Homo Sapiens |